Publications

Proteoform: a single term describing protein complexity

Smith LM, Kelleher NL, Consortium for Top Down Proteomics "Proteoform: a single term describing protein complexity." Nat Methods, 2013, 10(3) p. 186-7

PubMed: 23443629
DOI:10.1038/nmeth.2369

Combining chemical labeling, bottom-up and top-down ion-mobility mass spectrometry to identify metal-binding sites of partially-metallated metallothionein.

Chen SH, Russell WK, Russell DH "Combining chemical labeling, bottom-up and top-down ion-mobility mass spectrometry to identify metal-binding sites of partially metalated metallothionein." Anal Chem, 2013, 85(6) p. 3229-37

PubMed: 23421923
DOI:10.1021/ac303522h

Top-Down Structural Analysis of Post-Translationally Modified Proteins by FTICR-MS with H/D Exchange and Electron Capture Dissociation.

Pan J, Borchers CH "Top-down structural analysis of posttranslationally modified proteins by Fourier transform ion cyclotron resonance-MS with hydrogen/deuterium exchange and electron capture dissociation." Proteomics, 2013, 13(6) p. 974-81

PubMed: 23319428
DOI:10.1002/pmic.201200246

Top down proteomics of human membrane proteins from enriched mitochondrial fractions.

Catherman AD, Li M, Tran JC, Durbin KR, Compton PD, Early BP, Thomas PM, Kelleher NL "Top down proteomics of human membrane proteins from enriched mitochondrial fractions." Anal Chem, 2013, 85(3) p. 1880-8

PubMed: 23305238
PubMed Central: PMC3565750
DOI:10.1021/ac3031527

High-resolution differential ion mobility spectrometry of a protein.

Shvartsburg AA, Smith RD "High-resolution differential ion mobility spectrometry of a protein." Anal Chem, 2013, 85(1) p. 10-3

PubMed: 23244633
PubMed Central: PMC3552553
DOI:10.1021/ac3029129

Application of the ETD/PTR reactions in top-down proteomics as a faster alternative to bottom-up nanoLC-MS/MS protein identification

Drabik A, Bodzon-Kulakowska A, Suder P "Application of the ETD/PTR reactions in top-down proteomics as a faster alternative to bottom-up nanoLC-MS/MS protein identification." J Mass Spectrom, 2012, 47(10) p. 1347-52

PubMed: 23019167
DOI:10.1002/jms.3086

Top-down Targeted Proteomics for Deep Sequencing of Tropomyosin Isoforms

Peng Y, Chen X, Zhang H, Xu Q, Hacker TA, Ge Y "Top-down targeted proteomics for deep sequencing of tropomyosin isoforms." J Proteome Res, 2013, 12(1) p. 187-98

PubMed: 23256820
PubMed Central: PMC3596867
DOI:10.1021/pr301054n

Native Mass Spectrometry Characterization of Intact Nanodisc Lipoprotein Complexes

Marty MT, Zhang H, Cui W, Blankenship RE, Gross ML, Sligar SG "Native mass spectrometry characterization of intact nanodisc lipoprotein complexes." Anal Chem, 2012, 84(21) p. 8957-60

PubMed: 23061736
PubMed Central: PMC3536499
DOI:10.1021/ac302663f

Top-Down Proteomics and Direct Surface Sampling of Neonatal Dried Blood Spots: Diagnosis of Unknown Hemoglobin Variants

Edwards RL, Griffiths P, Bunch J, Cooper HJ "Top-down proteomics and direct surface sampling of neonatal dried blood spots: diagnosis of unknown hemoglobin variants." J Am Soc Mass Spectrom, 2012, 23(11) p. 1921-30

PubMed: 22993042
DOI:10.1007/s13361-012-0477-9

Top-Down FTICR MS for the Identification of Fluorescent Labeling Efficiency and Specificity of the Cu-Protein Azurin.

Nicolardi S, Andreoni A, Tabares LC, van der Burgt YE, Canters GW, Deelder AM, Hensbergen PJ "Top-down FTICR MS for the identification of fluorescent labeling efficiency and specificity of the Cu-protein azurin." Anal Chem, 2012, 84(5) p. 2512-20

PubMed: 22320330
DOI:10.1021/ac203370f

Filter diagonalization method-based mass spectrometry for molecular and macromolecular structure analysis.

Kozhinov AN, Tsybin YO "Filter diagonalization method-based mass spectrometry for molecular and macromolecular structure analysis." Anal Chem, 2012, 84(6) p. 2850-6

PubMed: 22376180
DOI:10.1021/ac203391z

Purification and High-Resolution Top-Down Mass Spectrometric Characterization of Human Salivary α-Amylase.

Peng Y, Chen X, Sato T, Rankin SA, Tsuji RF, Ge Y "Purification and high-resolution top-down mass spectrometric characterization of human salivary α-amylase." Anal Chem, 2012, 84(7) p. 3339-46

PubMed: 22390166
DOI:10.1021/ac300083y

UV Radiation Induces Genome-Mediated, Site-Specific Cleavage in Viral Proteins.

Wigginton KR, Menin L, Sigstam T, Gannon G, Cascella M, Hamidane HB, Tsybin YO, Waridel P, Kohn T "UV radiation induces genome-mediated, site-specific cleavage in viral proteins." Chembiochem, 2012, 13(6) p. 837-45

PubMed: 22416020
DOI:10.1002/cbic.201100601

Characterization of deamidation of barstar using electrospray ionization quadrupole time-of-flight mass spectrometry, which stabilizes an equilibrium unfolding intermediate.

Jha SK, Deepalakshmi PD, Udgaonkar JB "Characterization of deamidation of barstar using electrospray ionization quadrupole time-of-flight mass spectrometry, which stabilizes an equilibrium unfolding intermediate." Protein Sci, 2012, 21(5) p. 633-46

PubMed: 22431291
PubMed Central: PMC3403461
DOI:10.1002/pro.2047

Top-down mass spectrometry of supercharged native protein-ligand complexes.

Yin S, Loo JA "Top-Down Mass Spectrometry of Supercharged Native Protein-Ligand Complexes." Int J Mass Spectrom, 2011, 300(2-3) p. 118-122

PubMed: 21499519
PubMed Central: PMC3076692
DOI:10.1016/j.ijms.2010.06.032